Browse of TCMCG006C35821 protein

CDS

Accession Number	TCMCG006C35821
gbkey	CDS
Protein Id	XP_013749907.1
Location	complement(join(5442403..5442781,5442867..5443375,5443572..5444346,5444478..5444548,5444621..5444685,5444804..5447668,5448554..5448719,5448799..5448861,5448956..5449024,5449166..5449204,5449311..5449433,5449520..5449581,5449659..5449733,5449850..5449985,5450278..5450345,5450427..5450563,5450646..5450734,5450832..5450912,5451004..5451111,5451179..5451259,5451345..5451443))
Gene	LOC106452362
GeneID	106452362
Organism	Brassica napus

Protein

Length	2019aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013894453.1
Definition	protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	Photoperiod-independent early flowering
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K11320        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000228        [VIEW IN EMBL-EBI] GO:0000785        [VIEW IN EMBL-EBI] GO:0000790        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005618        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006952        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009607        [VIEW IN EMBL-EBI] GO:0009617        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0010038        [VIEW IN EMBL-EBI] GO:0016514        [VIEW IN EMBL-EBI] GO:0030312        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042742        [VIEW IN EMBL-EBI] GO:0043207        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044427        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044454        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046686        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051707        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070603        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0098542        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1904949        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGTCTAGAGGTGGAAAGTCGATACCTGATTCAGCAATGTCGTCCAAAGGCTCCAAATCTCGACCTGATAGCGACTCCAAACCTAAGCGACACAAGACGCTGGAAGCTCCTAAAGAGCCGCGACGACCTAAAACTCACTGGGACCATGTTATCGAGGAGATGATTTGGCTCTCGAAGGACTTTGAGTCTGAGAGGAAGTGGAAGCTGGCTCAGGCAAAGAAAGTTGCTTTGAGGGCCAGCAAAGGCATGGTAGATCAAGCTTCTAGGGAAGAAAGGAAGCTTAAGGAAGAAGAACAGAGACTGAGGAAAGTAGCCCTTAATATCTCTAAAGACGTTAAAAAGTTTTGGATCAAAGTTGAGAAACTGGTGCTTTACAAGCATCAGCTAGTACGGAATGAGAAAAAGAAGAAGGCTATGGACAAGCAACTTGAGTTTCTGTTAGGCCAGACTGAGAGGTACTCAACTATGTTGGCAGAAAATTTAGTGGAGCCTTATAAACATGGCCACAACGAATCTCCAAAACCTATTCTGGCTATCGAATCAAAAAGTGATGAGGAAAGGGCAGAAGAGACACCTTCGGAGTTGAATGCTTCTGCAGGTCTTGAATCAGAAACTCTTGATGTCGATGAGGATTATGATATCAATCCCGAGGATGCGTCAGAAGATGATGAAGATACTATTGAGGAGGATGAAAAGCACTTCACCAAACAGGAAAGGCAAGAAGAGTTGGAAGCTTTGCAAAATGAAGTGGATTTACCAGTTGAGGAGCTACTCAGACGTTATACTTCTGGTAGAGTTAGCGGAGAAACCAGCCCAGAAAGAGATGAAAATGAAGCTAATCTGGCATCAGTAGGTGAAGATGATATAGAGGGTGACAAAAACAATCTTACAGCTTCTGAAGAAACTGAAGGGAGCCCAAGTGTTCGTCGTTCTAATGATAGCTTTGATCATTTAGCAGTATCCGAGACCCATACACCTGATCACAAGCCAGGCCCAAAAACTGCCTCTGTGAAGTCCGGAAAGGAAGATCAGACCTATGATTTCAACGATGAACAGGAGGATGTTGATTTTGTTGCTGCCACTGGTGAGGAAAAGGATGATGAGACGACACTGTCCGTTGAAGAGGAACTGGCAAAAGCAGATAGTGTGGACCCTGAGGACGAGATTGCTCTGCTACAGAAGGAGAGTGAAATGTCTATTGAAGAATTGCTTGCAAGGTATAAGGAGGATTTCGGTGGCAAGGATTTATCTGAAGATGATTCGTCAGATATCAGGCAGCAAGCTGATTCAGATGACGAAAATGTTGAATCAGCCGAATGTAAGCCAGCTTTACAGCCTTGCTCAGAAAAAGATGAAGGCACATCCAATGAAATAAAAGAAGATGATGCTAAAGATAGTAGTGACAAAATTGCTGATGCAGCAGCAGCAGCAAGATCTGCACAGCCAACTGGATTTACATACTCTACAACAAAAGTTAGAACGAAATTGCCGTTTCTTCTCAAGCATTCTTTACGTGAGTACCAACACATTGGCTTAGACTGGCTTGTCACGATGTATGAGAAAAGGTTGAATGGGATTTTAGCTGATGAAATGGGTCTTGGAAAGACGATCATGACCATCGCTCTTCTCGCACATCTTGCTTGTGATAAGGGGATATGGGGTCCCCATCTGATCGTGGTTCCAACAAGTGTGATGCTTAATTGGGAAACTGAGTTTCTTAAATGGTGTCCTGCATTCAAAATCCTCACCTACTTTGGGAGTGCAAAGGAGCGAAAACTCAAGAGACAAGGATGGATGAAGCTGAACTCCTTTCATGTATGCATAACAACCTATAGGCTAGTTATCCAGGACAGTAAAATGTTCAAGCGCAAGAAGTGGAAGTACTTGATTCTTGACGAAGCCCATTTAATTAAGAACTGGAAGTCTCAGAGATGGCAAACTCTGTTAAACTTCAATTCTAAACGCAGAATTTTGTTGACTGGTACACCGCTACAGAATGATCTTATGGAATTGTGGTCACTGATGCATTTTCTGATGCCACATGTCTTTCAGTCTCACCAGGAGTTCAAAGATTGGTTCTGTAACCCGATAGCAGGGATGGTGGAGGGCCAAGATAAAATCAACAGAGAAGTTATTGATCGCTTGCATAATGTCCTCCGTCCTTTCCTTCTACGACGCCTTAAAAGAGATGTAGAAAAACAACTTCCTCAGAAGCATGAGCATGTTATTTTCTGCAGATTGTCTAAGAGGCAGCGCAACTTGTATGAGGACTTCATAGCAAGCACAGAAACACAGGCTACGCTTAACAGCGGAAGCTTTTTTGGGATGATAAGTATCATAATGCAACTGCGGAAAGTTTGTAATCATCCTGATCTCTTTGAGGGGCGGCCTATTGTAAGCTCTTTTGATATGCCTGGCATTGATGTGCAGTTGAGTTCGAGAATCTGCTCTCTGCTTTTGAAAAGTCCATTTTCCAGAGTCGATCTTGAAGATCTGGGATTCGTATTCACCCATCATGATTTTTCTATGACTGCTTGGGAAGGGGATGAGATCAAGGCTATTTCAACGCCCTCCGATTTGATCAAGCAGCGGGTGGACTTGAAGGATAATCCAGAAGAAGTTCCTCTGAGTTTAGTAAACCGCAAAAATCTGCAAGGGACAAGTATTTTTGAAGAAATTCGTAAGGCCGTCTTTGAGGAAAGGGTTAAAGAATCGAAGGATCGGGCAGCAGCCATTGCATGGTGGAATTCTTTGAGATGCCGGAGAAAGCCTACTTACTCTACATCTTTAAGAACTCTTCTAACCATTAAGGGTCCTCTTGATGATATACGCCATCTCAAAGCTAATCGTCCATCTTACATGTACTCCTCAATGCTCGCTGACATAGTTCTTTCACCGATCGAGCGTTTTCAGAAGGTAATTGAGCTAGTCGAAGCTTTCACGTTTGCGATTCCTGCTGTGCCTTCACCTGCTTGCTGGTGCAGCAAAAGTGACTCTCCTATTTTTCTTAGTCCATCGTACAAGGAGAAAGTTACAGATCTATTGTCACCTCTTCTGTCTCCGATTAGACCTGCGATTGTTAGGAGACAAGTATATTTTCCAGATAGGCGGCTGATACAGTTTGACTGTGGTAAACTGCAGGAGCTTGCTATGCTACTGAGAAAATTAAAATTTGGGGGTCACAGAGCGTTGATATTCACGCAAATGACCAAGATGCTTGACATCTTGGAGGCTTTCATTAGTTTATACGGTTATACCTACATGCGTCTTGACGGTTCTACTCCACCAGAAGAGAGGCAGACATTAATGCAGCGGTTTAACACAAATCCCAAGATTTTTCTCTTCATCTTGTCAACCCGAAGTGGGGGTGTAGGCATAAACCTTGTTGGTGCAGACACAGTAATCTTCTATGACAGTGACTGGAATCCCGCAATGGATCAACAAGCTCAAGATCGCTGCCACAGGATTGGTCAGACACGGGAAGTGCATATTTATCGGTTGATAAGTGAGAGCACCATTGAAGAGAATATCTTGAAGAAGGCAAACCAGAAGCGTGCGCTTGATAACCTAGTTATTCAGAATGGTGAATATAACACCGAGTTTTTCAAGAAGCTCGACCCAATGGAATTGTTCTCTGGGCATAAAACTCTGACTAGGAAGGATGAAGAGGAAAAGAGCAAGAATTGTGAGGCGGAGCTCCCTCTGTCAAACGCAGATGTCGAGGCTGCTTTAAAACATGCAGAAGATGAAGCAGATTATATGGCTCTCAAAAGAGTAGAAGAAGAAGAAGCTGTGGAGAATCAAGAGTTTACAGAAGAACCTATAGAGAGACCAGAAGACGATGAGCTAGTAAATGAGGATGACATTAAGTCTGATGAGCCTGCTGATCAAGGTGTAGCTGCAGCTGGTTCGGCTAAAGAAGAAGTTTCATTGGTACCTATTGATAACAGGGATGAGAGAGATGACATCATTACTTTAAGCCAAGAAGAAGATAATGATGTACCAGATGATGTCAAGCAAATGGCTGCAGCAGCCGCTGCTGCTGGACAAGCTATCTCATCTTTTGAGAACCAGCTGCGTCCTATTGATAGATATGCGATTAGATTTTTAGAGGTTTGGGACCCCATCATTGTTGAGGCTGCTATTGAAAATGAAGCGGGATTTGAAGAGAAAGAATGGGAACTTGACCACATTGAGAAGTACAAGGAGGAAATGGAAGCTGAAATTGATGATGGTGAAGAGCCTCTTGTTTATGAGAAATGGGACGCTGATTTTGCAACAGAGGCATACAGGCAGCAAGTTGAAGTTTTAACTCAGCACCAGTTGATGGAAGATCTAGAAAATGAAGCTAGAGAGAGGGAGGCTGCAGAAGAGGCTGAAAGGCGTTTGGCACTGAACGAAAGTGCCCATGTACTTAAACCTAAGAAGAAGAAAAAGGTGAAGAAAGCCAAATATAAATCCCTGAAAAAAGGATCACTCGGGTCCGAGTCAAAACAAGCGAAGCCAGTGGTGAAAGTTGAAGCTTCGAGTGATGAAGACAATGAAGAATGCGGATATGTGAGTAGCAGTGACTCAGACATGGTCTCACCGCGTTTGCAGAAACGTATGAAAGGCAAGAAAAGAGAATTAGTCTTCGACAGTGATGAAGAGAAGAACTCGAAGAAGAAAGCAAAGAAGCATAAGAAGTCTCTTTCACATTCAGATATCAAATGCAAGACTCCGCATGATGAGCTGGTTCCATCAAAGCCGTCTGACAGTATGGCTGTTGATAATGAACTGAAACCCGCAAACAGGGGTAAAACCCTAGGGAAAAAATTCATCATTTCTATGCCAATAAAGCGTGTTCTTATGATCAAGCCAGAGAAATTGAAGAAAGGAAATCTCTGGTCTAGAGACTGTGTTCCCTCGCCTGATTCTTGGTTGCCTCAGGAAGATGCTGTATTGTGTGCTATGGTTCATGAATATGGGTCTAACTGGAGTTTAGTTAGCGAGACTCTTTACGGAATGACTGCTGGTGGAGCTTACAGAGGAAGGCATCGCCATCCTGCATATTGTTGTGAGAGATATAGGGAGCTTATGCAGCGACATGTTTTGTCTGCTTCCGACAGTGTAGTGAACGAAAAGAACCTCAACGCTGGTTCTGGGAAGGCTCTCCTTAAAGTAACTGAGGAAAATATGCGGGCACTTCTAAATATTGCAGCTGAGCAGCCAGATACGGAGATGCTCCTTCAAAAACACTTTACTTGCTTGCTGTCTTCAATTTGGAGGACGTCAACACGCTCTACAAACAATCAAAAGCTCTCCTTAAATAGTCCCATATTCAATAGACAGGTTATGGGTTCTGCGAATCACGCTCAAGAATTAGCGAGAAAACCTTTTCAGGGGATGAAGATCACCAGCTTAAGTAGCAAGTTGGTAGAATCCGCTCTCCAGGACTCGAGCACGAGTCAGCCAGTCGATACTGCTTCTCGTTCTAGATTACAGGAGGATCAACCTATCAATAAAGTGGGATTAGACCTAACCTTGGAGTTCCCACGTGGCAATGATGATTCCTCGACTCATTTCCCACCCATCATAAAGCTAACTATTGATGGATCAGATTCATTCAATTATGTGAATGACCCTCCAGGGGAAGATAAGCTCAAAGTATCTCGGATTGCTGCAGAGGACCGTTACAGGAATGCTGCAAATGCGTGTATTGAAGATTCATTTGGATGGGCTTCAAACACGTTCCCCGCATATGATCCGAAGTCGAGAAGTGGAGTGAAAGCACCGTCTCTGGGGAAGCACAAGCTATCCGCCTCAGACACACCCAAGTCCTCAAAGAGCAAACAGCGAAAACTCTCAGCAGCAGAACAATCGGAAGTGGCATGGGTGAGGCGAAATGATCCTAACCTCAAGTTCGATTTTACACCTGCGGATAGGGAAGAGGAGGAAGAGGATAAGGAGGTTTCAGAAGAGATAGAGATGAGAGGTTGTCCACATTGGTATGATCCCTTGTTAACCTCAGGCCTTGATGATTGCTCATTAGCGTCTGAACCCTCAGGAATAGAGTAG

Protein:   MASRGGKSIPDSAMSSKGSKSRPDSDSKPKRHKTLEAPKEPRRPKTHWDHVIEEMIWLSKDFESERKWKLAQAKKVALRASKGMVDQASREERKLKEEEQRLRKVALNISKDVKKFWIKVEKLVLYKHQLVRNEKKKKAMDKQLEFLLGQTERYSTMLAENLVEPYKHGHNESPKPILAIESKSDEERAEETPSELNASAGLESETLDVDEDYDINPEDASEDDEDTIEEDEKHFTKQERQEELEALQNEVDLPVEELLRRYTSGRVSGETSPERDENEANLASVGEDDIEGDKNNLTASEETEGSPSVRRSNDSFDHLAVSETHTPDHKPGPKTASVKSGKEDQTYDFNDEQEDVDFVAATGEEKDDETTLSVEEELAKADSVDPEDEIALLQKESEMSIEELLARYKEDFGGKDLSEDDSSDIRQQADSDDENVESAECKPALQPCSEKDEGTSNEIKEDDAKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQDKINREVIDRLHNVLRPFLLRRLKRDVEKQLPQKHEHVIFCRLSKRQRNLYEDFIASTETQATLNSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMPGIDVQLSSRICSLLLKSPFSRVDLEDLGFVFTHHDFSMTAWEGDEIKAISTPSDLIKQRVDLKDNPEEVPLSLVNRKNLQGTSIFEEIRKAVFEERVKESKDRAAAIAWWNSLRCRRKPTYSTSLRTLLTIKGPLDDIRHLKANRPSYMYSSMLADIVLSPIERFQKVIELVEAFTFAIPAVPSPACWCSKSDSPIFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDILEAFISLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDNLVIQNGEYNTEFFKKLDPMELFSGHKTLTRKDEEEKSKNCEAELPLSNADVEAALKHAEDEADYMALKRVEEEEAVENQEFTEEPIERPEDDELVNEDDIKSDEPADQGVAAAGSAKEEVSLVPIDNRDERDDIITLSQEEDNDVPDDVKQMAAAAAAAGQAISSFENQLRPIDRYAIRFLEVWDPIIVEAAIENEAGFEEKEWELDHIEKYKEEMEAEIDDGEEPLVYEKWDADFATEAYRQQVEVLTQHQLMEDLENEAREREAAEEAERRLALNESAHVLKPKKKKKVKKAKYKSLKKGSLGSESKQAKPVVKVEASSDEDNEECGYVSSSDSDMVSPRLQKRMKGKKRELVFDSDEEKNSKKKAKKHKKSLSHSDIKCKTPHDELVPSKPSDSMAVDNELKPANRGKTLGKKFIISMPIKRVLMIKPEKLKKGNLWSRDCVPSPDSWLPQEDAVLCAMVHEYGSNWSLVSETLYGMTAGGAYRGRHRHPAYCCERYRELMQRHVLSASDSVVNEKNLNAGSGKALLKVTEENMRALLNIAAEQPDTEMLLQKHFTCLLSSIWRTSTRSTNNQKLSLNSPIFNRQVMGSANHAQELARKPFQGMKITSLSSKLVESALQDSSTSQPVDTASRSRLQEDQPINKVGLDLTLEFPRGNDDSSTHFPPIIKLTIDGSDSFNYVNDPPGEDKLKVSRIAAEDRYRNAANACIEDSFGWASNTFPAYDPKSRSGVKAPSLGKHKLSASDTPKSSKSKQRKLSAAEQSEVAWVRRNDPNLKFDFTPADREEEEEDKEVSEEIEMRGCPHWYDPLLTSGLDDCSLASEPSGIE